PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024974624.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family MYB_related
Protein Properties Length: 79aa    MW: 8945.9 Da    PI: 7.78
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024974624.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.34.2e-091359246
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                      +WT+   +l+ +a + +  +   +W +I+r +  g++++++k ++  
   XP_024974624.1 13 SSWTAKQNKLFEKALAVYDRDtpdRWQKISRAVD-GKSAEEVKRHYEV 59
                     58*****************99*************.**********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    
MSSNSLPSSS STSSWTAKQN KLFEKALAVY DRDTPDRWQK ISRAVDGKSA EEVKRHYEVL  60
IEDLRHIESG NVPVPNYGH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.12e-31MYB_related family protein