PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024974797.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 352aa MW: 38388.6 Da PI: 8.7784

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024974797.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.3	9.5e-40	45	105	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrn+PvGgg+rk+kk++ XP_024974797.1 45 PEQTLNCPRCDSNNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNIPVGGGCRKSKKAK 105 68999*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MVKLVHGSLS SFQLVMSNNI ALKQGRKDES QGSGGGRKTS SLRPPEQTLN CPRCDSNNTK 60 FCYYNNYNLT QPRHFCKTCR RYWTKGGALR NIPVGGGCRK SKKAKSSTSK FVIGDSSLDN 120 GGLKLLDGLS PPIMDFQLGG INFPPRLNQF TSSYGEASSS NLPFMNLDPL GFNFPLSTHA 180 TKQGDHHNQS GGGLANFQEM GFTYTNLHHS ASLTSSIESL SSLNQDLHWR LQQQRLAMLV 240 GGGGGGTVGG ENEHQRQQPK ETGLQPILFH NLEIPKSTPT SIDGESRKDG SSTGNGDVGG 300 LTTELFFDNN YAPVNLQNPT SAMNPENDQN GNVNNWNGIQ AWNHMNQYSA FP

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MVKLVHGSLS SFQLVMSNNI ALKQGRKDES QGSGGGRKTS SLRPPEQTLN CPRCDSNNTK  60
FCYYNNYNLT QPRHFCKTCR RYWTKGGALR NIPVGGGCRK SKKAKSSTSK FVIGDSSLDN  120
GGLKLLDGLS PPIMDFQLGG INFPPRLNQF TSSYGEASSS NLPFMNLDPL GFNFPLSTHA  180
TKQGDHHNQS GGGLANFQEM GFTYTNLHHS ASLTSSIESL SSLNQDLHWR LQQQRLAMLV  240
GGGGGGTVGG ENEHQRQQPK ETGLQPILFH NLEIPKSTPT SIDGESRKDG SSTGNGDVGG  300
LTTELFFDNN YAPVNLQNPT SAMNPENDQN GNVNNWNGIQ AWNHMNQYSA FP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	7e-40	Dof family protein