PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024974814.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 268aa    MW: 30385.4 Da    PI: 5.9089
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024974814.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.35.9e-16101150255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr ++ +grW+AeI+dp +   r+r +lg+++t+ee a  +++a  kl+g
  XP_024974814.1 101 KFRGVRKRR-WGRWAAEIMDPAT---RQRLWLGTYDTPEENAMVYDNASIKLRG 150
                     89****887.**********954...4***********************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MEVPAMSEKF SDQEELPFPK LIRISMIDPY ATDSLGDEDD HIFGRWHVKK YVNEINIQPS  60
GKATMMPLNG NMTTTRNSPC DVDSKQKAMK KKKSPEGNVR KFRGVRKRRW GRWAAEIMDP  120
ATRQRLWLGT YDTPEENAMV YDNASIKLRG VGAITNFVMP TVLENPPPTN VTSMSDHHPN  180
RKSLKIPLVD APPLDYQSFD SIQLGDEVAS FNMHHDFGSI NLKQFDDFGI TPIAHDFIPQ  240
TGCGSPSTLK IDNYFEDISD STLDLWFS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
190109KKKKSPEGNVRKFRGVRKRR
291110KKKKSPEGNVRKFRGVRKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-36ERF family protein