PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024974928.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 188aa MW: 22101.4 Da PI: 5.0702

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024974928.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51	3e-16	75	133	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++rr+++NRe+ArrsR RK++ ++eL v L +eN++L ++l++ + +++++ +e+ XP_024974928.1 75 RKQRRMISNRESARRSRMRKQKHLDELWSQVIWLRNENHQLVDKLNKFSGTYDQVLQEN 133 689**************************************************999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MQAGELTNSL YLLQPNQTLN NSPILQFNVD TPVNQVYHLD TNPQFQEMNL QSTYIRSNWT 60 SDEADEQQLS LINERKQRRM ISNRESARRS RMRKQKHLDE LWSQVIWLRN ENHQLVDKLN 120 KFSGTYDQVL QENAQLKEEA SELREMVTKL QLNGTYSTLE DLDDIHSHTA YFRTESSNPS 180 ISSSSDFF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	95	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	1e-47	bZIP family protein