PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024974943.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ZF-HD
Protein Properties Length: 117aa    MW: 12821.2 Da    PI: 5.5942
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024974943.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer99.42.6e-313798260
     ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegee...gtaaalkCaACgCHRnFHRreveee 60
                    ++vrY eC++NhAa++Gg+avDGC+Efm++ g++    t a+l+CaACgCHRnFHRr ve+e
  XP_024974943.1 37 THVRYGECQRNHAANIGGYAVDGCREFMAAAGDQeeeETEASLTCAACGCHRNFHRRVVETE 98
                    579*************************9976542236699****************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
MTKRRVVLKR EEPPPPPLPP PPPPSMDSAN SSNTMRTHVR YGECQRNHAA NIGGYAVDGC  60
REFMAAAGDQ EEEETEASLT CAACGCHRNF HRRVVETEVV CSSDDSWPSS SSSPYLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.19e-32ZF-HD family protein