PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024975240.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 213aa    MW: 23909 Da    PI: 4.9972
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024975240.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.93.8e-1657107155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+Wv+e+r p   +k+++ +lg++ ta++Aa+a++ a ++++g
  XP_024975240.1  57 PVYRGVRRRD-SGKWVCEVRQP---NKKTSLWLGTYPTADMAARAHDVAVLAMKG 107
                     68*****999.7******8887...347**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MTTFIQFNTF SPPTESCSTS DCSTTGSNSF FDEEIKLASR NPKKRAGRKK FKETRHPVYR  60
GVRRRDSGKW VCEVRQPNKK TSLWLGTYPT ADMAARAHDV AVLAMKGRSA CLNFADSLWR  120
LPIPESSSVK DIQRAAVEGA EAFRPVESDV AEVEESKELA GNVFYMDEEA IFGMPEFFAY  180
MAEGLMLPPP ITVGYDNCED NVEFSIDASL WTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.12e-74ERF family protein