PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024975252.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 168aa    MW: 17734.5 Da    PI: 4.804
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024975252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.52.6e-163584155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+G+r ++  g+Wv+eIr+p   +k++r++lg++ t+e+Aa+a++ a+++l+g
  XP_024975252.1 35 PVYHGIR-CR-AGKWVSEIREP---NKSTRIWLGTYPTPEMAAAAYDVAALALKG 84
                    6799**9.65.7*********9...336************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MANRRRRNSS AFQLPDNEDN PQPIVADGSS SRQQPVYHGI RCRAGKWVSE IREPNKSTRI  60
WLGTYPTPEM AAAAYDVAAL ALKGRYAVLN FPDSVLSRML PECPTADDIR AAAARAAAAQ  120
ALSIESGGSS SGGGTTPPGQ GEVMDDEAVF GVGNHSDDET DNSGGGEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12630.14e-26ERF family protein