PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024975496.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 176aa    MW: 19237.3 Da    PI: 8.6184
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024975496.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.4e-173786255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     ykG+r +k +g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  XP_024975496.1 37 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTPVAAARAYDTAVYYLRG 86
                    59*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MEGRRGGGGG GGGGGGGELE ALCNCSSTGK RKNDQRPYKG IRMRKWGKWV AEIREPNKRS  60
RIWLGSYSTP VAAARAYDTA VYYLRGPSAR LNFPELLASD GGPDELSAAS IRKKAIEVGA  120
RVDAETSCTT SLSTSSTHDH HHHHHASTSE LKPCWFQEKP DLNKKPEPED PDGDYW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.18e-52ERF family protein