PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024975518.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 191aa MW: 21813.3 Da PI: 7.0776

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024975518.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.7	7.7e-11	79	123	5	49
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 ++ rr+++NRe+ArrsR RK++ +e+L++ L++ Nk+L ++l XP_024975518.1 79 RKRRRMISNRESARRSRMRKQKHLENLRNQLNRLKTGNKELTNRL 123 5789*************************************9776 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MLSEVFPTAG DHLSSDGAGF FETGGFTPWD TQENPFLFTP QEPVFSFSGS GSDNSTPKTN 60 SSDDGEMNPP EEDVVVDERK RRRMISNRES ARRSRMRKQK HLENLRNQLN RLKTGNKELT 120 NRLRVVNLHG QLLREENQSL RSESVMLQQK LGDIRQVLLV QQLHHQLIPS AWPCNNNVTT 180 IYEQNPPSLI T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	79	83	RKRRR
2	79	100	RKRRRMISNRESARRSRMRKQK
3	92	99	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49760.1	1e-17	bZIP family protein