PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024975562.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 171aa    MW: 18569.9 Da    PI: 9.732
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024975562.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.6e-202778256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+G+r+++ +gr++AeIrdp+ ng  +r +lg+f+taeeAa+a+++a+ +l+g+
  XP_024975562.1 27 KYRGIRRRP-WGRYAAEIRDPTRNG--ARSWLGTFDTAEEAARAYDRAAYALRGH 78
                    8********.**********98887..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MDANQEAAGG GGGSTTGGGE RGRRENKYRG IRRRPWGRYA AEIRDPTRNG ARSWLGTFDT  60
AEEAARAYDR AAYALRGHQA ILNFPNDGHY RNVNSSTAEP PSTSDSSSIM PPLPLNPSSS  120
SSSMSSSSLS LSSSSFSSRN NRGRRXEAVI ELEYLDDKLL EDLLGKHSPT R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.16e-24ERF family protein