PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024975588.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 254aa    MW: 28538.5 Da    PI: 7.684
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024975588.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.16.4e-1375127255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +  hn+ Er RR+++N+ ++ Lr+llP + + ++kK+s   ++ +A +YI +Lq
  XP_024975588.1  75 KLDHNASERDRRKKVNDLYAFLRSLLPVS-SDHKKKVSIPGTVSRALKYIPELQ 127
                     678*************************6.367777***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MLALSPPVFS TTYGWPLEDL ITPNLHQQDC NEANSYYNSL THFPTYDQMK NDFPPESVSL  60
NNGGAGDHAM MVVKKLDHNA SERDRRKKVN DLYAFLRSLL PVSSDHKKKV SIPGTVSRAL  120
KYIPELQKEV ETLKSKKKRL SSSSSTDKTS KDYHVIKSSK DAMVVSSVNA LSDKEAVIQL  180
ISSADHMSKN KEIGFLSKVL EYLEQEEDGI VLLNATTFKC SGEGMLLNTL HVQVQGDYRI  240
EAEKLKEKLC VFHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.16e-36bHLH family protein