PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024975884.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 697aa MW: 75520.6 Da PI: 6.6662

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024975884.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.2	7.6e-13	208	269	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ek+ k+ r+++NRe+A+ sRqRKk ++eeLe+kv ++ + ++L ++ e a+lk++ XP_024975884.1 208 EKDEKKKARLIRNRESAQLSRQRKKHYVEELEDKVRAMHSTIQDLNARITYFAAENATLKQQ 269 7899*****************************************************99997 PP

Sequence ? help Back to Top
Protein Sequence Length: 697 aa Download sequence
MADAQAMPDS LPIPPIFSDD LTLPDDFLSF DDEDFDITFD DIHLPSDTED FFNSAFKSSN 60 PIDLSSSDPE FNDFVSDPET IVADSGHHGS DVSGFLNILS PDDSGKGFVH ESVRVLDDSS 120 PESRHENPVS SQGSGNCGSA GSDAAMNCPS PDSGNSVVDQ KVKRESGSNF VLKRKKESSD 180 GSPESRTMKF RRSNETSTTT ENSDQVNEKD EKKKARLIRN RESAQLSRQR KKHYVEELED 240 KVRAMHSTIQ DLNARITYFA AENATLKQQM VAGGGPVCSP PVMYPPHPAM APMGYPWMPC 300 PPYVVKSQGS QVPLVPIPRL KPQQPPSSQK VKKVEVKKTE GTTKTKSKTK TKTKKVASIS 360 FLGFLLFIVL FGGLVPTMNV KFGGATNGGY SGGSNDYRFY EQQHPGRVLM GGDHVNGTNH 420 RTGVGSGRAN EHNASEPLVA SLYVPRNDKL VKIDGNLIIH SVLASEKAMA SQEEQGMTKK 480 EDTGLAVALD LVPAISIPAV GRNGGRQPHM YRTSSDRQRA LSSDNENLKS KPADGKLQQW 540 FREGLAGPML SSGMCTEVFQ FDVSVASASG AIVPATSVGN ITAEDHRENS TYITTTTVKN 600 RRILHGLPIP ISNITKEHVA GHESKHEEHH KNNSVSSMVV SVLVDPREAG DGGGDVEGMM 660 GGKSFSRIFV VVLLDSVKYV TYSCMLPLKG AGHLVTA

Sequence ? help Back to Top

Protein Sequence Length: 697 aa Download sequence

MADAQAMPDS LPIPPIFSDD LTLPDDFLSF DDEDFDITFD DIHLPSDTED FFNSAFKSSN  60
PIDLSSSDPE FNDFVSDPET IVADSGHHGS DVSGFLNILS PDDSGKGFVH ESVRVLDDSS  120
PESRHENPVS SQGSGNCGSA GSDAAMNCPS PDSGNSVVDQ KVKRESGSNF VLKRKKESSD  180
GSPESRTMKF RRSNETSTTT ENSDQVNEKD EKKKARLIRN RESAQLSRQR KKHYVEELED  240
KVRAMHSTIQ DLNARITYFA AENATLKQQM VAGGGPVCSP PVMYPPHPAM APMGYPWMPC  300
PPYVVKSQGS QVPLVPIPRL KPQQPPSSQK VKKVEVKKTE GTTKTKSKTK TKTKKVASIS  360
FLGFLLFIVL FGGLVPTMNV KFGGATNGGY SGGSNDYRFY EQQHPGRVLM GGDHVNGTNH  420
RTGVGSGRAN EHNASEPLVA SLYVPRNDKL VKIDGNLIIH SVLASEKAMA SQEEQGMTKK  480
EDTGLAVALD LVPAISIPAV GRNGGRQPHM YRTSSDRQRA LSSDNENLKS KPADGKLQQW  540
FREGLAGPML SSGMCTEVFQ FDVSVASASG AIVPATSVGN ITAEDHRENS TYITTTTVKN  600
RRILHGLPIP ISNITKEHVA GHESKHEEHH KNNSVSSMVV SVLVDPREAG DGGGDVEGMM  660
GGKSFSRIFV VVLLDSVKYV TYSCMLPLKG AGHLVTA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	1e-134	bZIP family protein