PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024976217.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 269aa    MW: 30685.8 Da    PI: 6.0512
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024976217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.45.6e-16102152256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +++GV+ + ++grW++eI+dp +   r+r +lg+++t eeAa  +++a  kl+g+
  XP_024976217.1 102 KFRGVWKR-RWGRWAVEIMDPAT---RQRLWLGTYDTSEEAAMVYDNATIKLRGA 152
                     89***755.5**********954...4*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MEVLAMSEKF SDQEELPFPK LIRISMTNPY ATDSSGDEDD HIFEQWRVKK YVNEINVQPS  60
SKARMMPLNG NKMTTRNSPC AVDSKLKSMK KKKKSLEDSV RKFRGVWKRR WGRWAVEIMD  120
PATRQRLWLG TYDTSEEAAM VYDNATIKLR GAGAITNFVL PTVLENPPPT NVTSMSDHHP  180
NRKSLKLILA DAPPLDYQSF DSIQLDDEVA SFNMHHDFRS INPKQFDDCG ITPIPPDFIP  240
QSGCGSPSTL KIDNYFEDIS DSTLDLWFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-34ERF family protein