PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024976269.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 267aa    MW: 29612.9 Da    PI: 9.8732
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024976269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.5e-184897255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     +kGVr++  +grWv+eIr+p+    +  r +lg+f ta eAa a++aa++kl+g
  XP_024976269.1 48 TFKGVRQRT-WGRWVSEIREPK----HgERLWLGTFNTAREAALAYDAAARKLYG 97
                    69****999.**********93....46*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MSYVLVVGNK DGDGGARRRE ARKPPAARAS SRKGHMKGKG GPLNAACTFK GVRQRTWGRW  60
VSEIREPKHG ERLWLGTFNT AREAALAYDA AARKLYGPNA ELNLPDEVAA PPPRPIASRR  120
AAAVMAAAAA RARYHRLLLE IKMKQEIEKQ KEMEMQAYLL QVQQVQVQQM QMVVNGGIAV  180
AVSGYDHHDL TNYGSRSTDY RKTVGMGFED MMKSNLNTKL PEFDDSQMWV EAASTMDYQI  240
QAIGDPGIAA HTFDDAIGID LKHPLMM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.12e-29ERF family protein