PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024976329.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 264aa    MW: 29550.8 Da    PI: 7.2954
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024976329.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-19101150255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     + +r++lg+f tae Aa a+++a+++++g
  XP_024976329.1 101 HYRGVRQRP-WGKWAAEIRDPQ----KaARVWLGTFETAEAAALAYDEAALRFKG 150
                     7********.**********93....36***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MQKVKVADHR RHGKRGLPPD HQSESQSQSQ LDDDDIDNID DEQQQIFPVY SPRSQQDMSA  60
IVSALSQVIG TTDVPLISTS APTANQPPPI QDHPGNQRRR HYRGVRQRPW GKWAAEIRDP  120
QKAARVWLGT FETAEAAALA YDEAALRFKG TKAKLNFPER VQGRTELGYF ITRPQLQIPV  180
PPTNFLPNSQ LPAAHHLLRP PTQSTYPNLL DYTQFLRGAN EHGMPTNVLN CTTSSSSMDM  240
GSSSSAGPSQ FWQDFDPTNQ SRDQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.13e-31ERF family protein