PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024976426.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 241aa    MW: 26206.3 Da    PI: 7.5056
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024976426.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.93e-19118168255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp + g  +r++lg++ taeeAa a++ a+ +++g
  XP_024976426.1 118 HYRGVRQRP-WGKFAAEIRDPAKSG--ARVWLGTYETAEEAATAYDIAAYRMRG 168
                     8********.**********96654..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MMQIPSHAVD AFPTTNSGEV PAFCRSLSFS SLIPCLSENW GDLPLKVDDS EDMVIYGILR  60
DAYSVGWTPF NFSGKEIKAE SNELETEPAT RTPPLSVAPA KVEEAVSTSL AASPKGKHYR  120
GVRQRPWGKF AAEIRDPAKS GARVWLGTYE TAEEAATAYD IAAYRMRGSK ALLNFPHRIG  180
LNEPEPVRVT SKRRSPEPSS SFSSASVNGS PKRRNTKGST AEQVELEVQS RSSNVIEAVS  240
G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-53ERF family protein