PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024976751.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 335aa MW: 37599.7 Da PI: 8.536

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024976751.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.3	8.2e-39	97	156	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC s++tkfCyynny+++qPr+fCk+C+ryWt+GGa+rn+PvG+grrknk+ XP_024976751.1 97 PDKILACPRCTSMDTKFCYYNNYNVNQPRHFCKSCQRYWTAGGAMRNMPVGAGRRKNKNP 156 7899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MEDPGIKLFG KKIVLPEINK SINLPVMFTA GGADKDGGYD HTRGLLKDSL EGKRVNREGV 60 EKDHMVESEN PKTPSIEEET RTQKSESNPQ TKTLKKPDKI LACPRCTSMD TKFCYYNNYN 120 VNQPRHFCKS CQRYWTAGGA MRNMPVGAGR RKNKNPASHC RFITIPQETH CVSGGSTVTT 180 SDSTPENFQD QNRFHSHVHS IPGVSWSYNP WNSRIPIPAI CPPMPIYPST NWNCIPFLPP 240 CDPILGKHSL DSDDCDQDLK KPKNSVLIPK TLRIDDPDEA AKSSIWATLG IKNENFKAFE 300 EKGEERKKRP ATITSPVLYA NPAAFSRSLC FQEMA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62430.1	1e-65	Dof family protein