PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024976830.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

NF-YB

Protein Properties

Length: 207aa MW: 21936.2 Da PI: 7.2136

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024976830.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	185.1	5.3e-58	19	114	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfedyveplkvyl+++r++ege XP_024976830.1 19 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFRDMEGE 113 89********************************************************************************************9 PP NF-YB 97 k 97 k XP_024976830.1 114 K 114 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MADSDNESGG GHNGDHSLRE QDRFLPIANV SRIMKKALPA NAKISKDAKE TVQECVSEFI 60 SFITGEASDK CQREKRKTIN GDDLLWAMTT LGFEDYVEPL KVYLQRFRDM EGEKTALAGR 120 QGSEKEGGGA PTASGGGGGN GSVVNMGNNG GGFHENNGGG MYGTMMGHHH QGGHVYGSGG 180 YYRMGSNPSS KIGSVYPGSG PLNGRSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	7e-77	NF-YB family protein