PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024976888.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ZF-HD
Protein Properties Length: 246aa    MW: 27425.3 Da    PI: 7.9538
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024976888.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.33.3e-324397459
     ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                    +rY+eClkNhA+ +GghavDGCgEfm++ g+egt +alkCaAC+CHRnFHR+e e 
  XP_024976888.1 43 YRYRECLKNHAVGIGGHAVDGCGEFMAA-GDEGTLDALKCAACNCHRNFHRKELEG 97
                    79*************************9.999********************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MEFDEHEEQE EEVGIQLPPG NYDAIGNSGR GREVRKSGGG GGYRYRECLK NHAVGIGGHA  60
VDGCGEFMAA GDEGTLDALK CAACNCHRNF HRKELEGQQR HQQQQQQHQY LTATPYYHHH  120
HQRPTGYLHM TPAPSSHHQR PLALPSTSRE DLEEISNPSS SGGGGGGGVG GGSGSRKRFR  180
TKFTQDQKDR MLAFSETLGW RIQKQDEAAV QQFCAETGVK RHVLKVWMHN NKHTIDIMNR  240
SKSKEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.11e-59ZF-HD family protein