PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024976943.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 353aa MW: 40112.4 Da PI: 7.3904

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024976943.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.7	4.6e-12	68	104	4	40
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 k +rr+++NReAAr+sR++Kka+++eLe +L + XP_024976943.1 68 EKLQRRLAQNREAARKSRLKKKAYVQELESGRLKLAK 104 599*************************984444433 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MVSTSTQFST SRTMGTYDPF HYVSMQQDTL GGQVSQNTSH LLASQLEPRL TNNESLESSQ 60 DLKNDISEKL QRRLAQNREA ARKSRLKKKA YVQELESGRL KLAKLEHEIE RTRQQGAYVD 120 LSNTVHGLLS GNFDSGIAIF ETKYDLWVVE QHKKESQLMA ILQTDVNDVE LRVVVDGVVN 180 HYHDLFQMKA DAAKSDAFNL LYGTWRSPVE RLFQWLGGFR PSEVLYTLMP WFEPLTDTQV 240 VNLSKLRHTC RQAEDALTQG IDKLEQTLAQ GVGINMTEGG SYGIQMKSAM EGLEALENFL 300 NQADHLRYRT LQQMSRILTV RQAARGLVAL GEYFQRLRVL NSLWSSRPHG IGS

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MVSTSTQFST SRTMGTYDPF HYVSMQQDTL GGQVSQNTSH LLASQLEPRL TNNESLESSQ  60
DLKNDISEKL QRRLAQNREA ARKSRLKKKA YVQELESGRL KLAKLEHEIE RTRQQGAYVD  120
LSNTVHGLLS GNFDSGIAIF ETKYDLWVVE QHKKESQLMA ILQTDVNDVE LRVVVDGVVN  180
HYHDLFQMKA DAAKSDAFNL LYGTWRSPVE RLFQWLGGFR PSEVLYTLMP WFEPLTDTQV  240
VNLSKLRHTC RQAEDALTQG IDKLEQTLAQ GVGINMTEGG SYGIQMKSAM EGLEALENFL  300
NQADHLRYRT LQQMSRILTV RQAARGLVAL GEYFQRLRVL NSLWSSRPHG IGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77920.1	1e-112	bZIP family protein