PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024977041.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 573aa    MW: 62167 Da    PI: 7.5911
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024977041.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.39e-30229286260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     dDgynWrKYGqK+vkgsefprsYYrCt+++C++kk  e+s   ++++ei+Y+g+H+h+k
  XP_024977041.1 229 DDGYNWRKYGQKVVKGSEFPRSYYRCTHPNCEAKKIFECSY-TGQITEIIYKGTHDHPK 286
                     8**************************************99.9**************85 PP
2WRKY106.41.4e-33400458159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+v+g+++prsYY+CtsagC+v+k+ver+++dpk+v++tYeg+Hnh+
  XP_024977041.1 400 LDDGYRWRKYGQKVVRGNPNPRSYYKCTSAGCSVRKHVERASHDPKAVITTYEGKHNHD 458
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 573 aa     Download sequence    
MEEEASSNSH CGHHLSSGGD AAVSTSTGGG GARYKLMSPA KLPISSSTSI TIPHGLSPTS  60
FLDSPILLTN VKPEPSPTTG FFLKSQLMQR YSSSAAFLLN AKASAGEELD VSNSSLYESR  120
QHMGSAAVSG CSSAALQVSA GFNLQQSEPS GQKQNQSESR PNALSSLTNC EMAAPKEQSL  180
AAPVCMLAPG VAAFHGETNG VGVTKSRLHQ SDLCHKDAGP LVLFDRSSDD GYNWRKYGQK  240
VVKGSEFPRS YYRCTHPNCE AKKIFECSYT GQITEIIYKG THDHPKPQPN RRFTAGALMS  300
IQDENDDKRL SVPGQVGLSA TSGQVHNFET CGTPLQSPNQ ANDNMDGTVP QLNITNDEVE  360
DNPNLKRRRT DFGTLDVTAV VKPIREPRVV VQTISEIDIL DDGYRWRKYG QKVVRGNPNP  420
RSYYKCTSAG CSVRKHVERA SHDPKAVITT YEGKHNHDLP TAKSSNHDIA GNGNRKIRSE  480
AENAICLDLI VGNRFSGKQP QALNAEAIHS QEHASNSSFN RVFQSACYGM VNGGIDVYGY  540
RENEFGTHSF DIATLNHSSD QYPRNLGRVL LGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.21e-142WRKY family protein