PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024977080.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 213aa    MW: 23579.6 Da    PI: 9.2587
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024977080.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76.1e-183180255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykGVr ++ +g+Wv+eIr p   +++ r++lg++ t+e Aa+a++aa ++ +g
  XP_024977080.1 31 KYKGVRMRS-WGSWVSEIRAP---NQKSRIWLGSYSTPEAAARAYDAALLCVRG 80
                    8*****998.**********9...336***********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MAKKGQKFRS QPLKTVLSSP LPSTPSLSKE KYKGVRMRSW GSWVSEIRAP NQKSRIWLGS  60
YSTPEAAARA YDAALLCVRG PIANLNFSQH QYDHTTTTTT TMMSPKSIKR VAALAAATIP  120
SPSPSPPPSP ILSSPSYSSQ LSTVSPSKSS SYNKEKNQRF YLENDPLDGT LMSMVAPWCN  180
FDSPTYNDMM CNESAYDPSD DEEGGEIRLW SFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.11e-30ERF family protein