PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024977321.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 363aa MW: 39051 Da PI: 7.001

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024977321.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.6	3.6e-40	54	114	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprCds++tkfCyynnysl+qPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+s XP_024977321.1 54 HDQALKCPRCDSAHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVS 114 7899******************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MGLTSFQVCM DSSDWFQGTI QEETGMDSSS PSGITDPMLA CSRPLMERRL RPQHDQALKC 60 PRCDSAHTKF CYYNNYSLTQ PRYFCKTCRR YWTKGGTLRN IPVGGGCRKN KKVSSSSKKT 120 SSATANNSND NTLHHHHQDH HQQNVNTHLI NPNANPNPNP NHHHHPLIMN SNDLQLSYPE 180 SSMQFSGPNL FGIGSSTNNI PSFMFENLNS TATRAIDFME NNGGGGNQFM GMMGSNGGYA 240 AEMGGGNVLT ANYHGGNLCS PFGGMTLDSI NNSFMERGLI AYDQGNDVND DTISGLDVKP 300 KLLALEWQDQ TGCSSDHHHV HGGSASSGGG GNGGSGGGYL TGLGSSWGGL MNGYGPSTTN 360 PLV

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MGLTSFQVCM DSSDWFQGTI QEETGMDSSS PSGITDPMLA CSRPLMERRL RPQHDQALKC  60
PRCDSAHTKF CYYNNYSLTQ PRYFCKTCRR YWTKGGTLRN IPVGGGCRKN KKVSSSSKKT  120
SSATANNSND NTLHHHHQDH HQQNVNTHLI NPNANPNPNP NHHHHPLIMN SNDLQLSYPE  180
SSMQFSGPNL FGIGSSTNNI PSFMFENLNS TATRAIDFME NNGGGGNQFM GMMGSNGGYA  240
AEMGGGNVLT ANYHGGNLCS PFGGMTLDSI NNSFMERGLI AYDQGNDVND DTISGLDVKP  300
KLLALEWQDQ TGCSSDHHHV HGGSASSGGG GNGGSGGGYL TGLGSSWGGL MNGYGPSTTN  360
PLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	2e-43	Dof family protein