PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024977724.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

NF-YB

Protein Properties

Length: 175aa MW: 19392.6 Da PI: 7.0585

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024977724.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	185.5	4e-58	25	122	1	98
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdrflPian+srimkk lPan+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfedy+eplk yl++yre+eg XP_024977724.1 25 VREQDRFLPIANISRIMKKGLPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKSYLNRYREMEG 119 69********************************************************************************************* PP NF-YB 96 ekk 98 ++k XP_024977724.1 120 DTK 122 975 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MAEGPASPGG GSHESGDLSP RSSNVREQDR FLPIANISRI MKKGLPANGK IAKDAKETVQ 60 ECVSEFISFI TSEASDKCQR EKRKTINGDD LLWAMATLGF EDYIEPLKSY LNRYREMEGD 120 TKGSGKGHEG SSRKDGMQPS HNPQLAHQNS YPQGLNYANS QSQAQHMMVQ MQRTE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37060.1	3e-87	NF-YB family protein