PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024978368.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 195aa    MW: 22083.9 Da    PI: 8.9257
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024978368.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.4e-19108158256
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr++  +g W+AeIrd +     r  r++lg+fgtae+Aa+a+++a+  ++ge
  XP_024978368.1 108 QYRGVRQRQ-WGTWAAEIRDpW-----RkVRVWLGTFGTAEQAARAYDRAAIHFRGE 158
                     69****999.**********88.....45***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MQNTIANHHH DGAMITARRY WTADEENSII VSALTNVICG SYTDTNPISS SSPVISLCAH  60
PMEVCQVCKI DGCLGCNYFW QKAPPCDGGK QRNVAGGRGE TKRKRKRQYR GVRQRQWGTW  120
AAEIRDPWRK VRVWLGTFGT AEQAARAYDR AAIHFRGEKA KTNFPESDYL QPEQRPPAVK  180
VEQECQKSMD TDHSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-30ERF family protein