PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024978536.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 197aa MW: 22984.4 Da PI: 5.826

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024978536.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.8	3e-15	84	135	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 ++ rr+++NRe+ArrsR RK++ ++eL v L +eN++L+++l++ +++ XP_024978536.1 84 RKRRRMISNRESARRSRMRKQKHLDELWSQVIWLRNENHQLIDKLNNFTETH 135 5789******************************************999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MQASELTDVH CLLPAYPNPN TTHLAMNLNN SSTIPFNVNP LSNPFYHLHM NPQFQDFNPQ 60 PMYFGSNSTS DEADEQQLSL INERKRRRMI SNRESARRSR MRKQKHLDEL WSQVIWLRNE 120 NHQLIDKLNN FTETHERAVE ENNQLKEEVS GLRQMVADMQ LNGTYTTLRD LDDIHCNDAY 180 LRTESSNQSV SSSSDFV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	84	88	RKRRR
2	84	105	RKRRRMISNRESARRSRMRKQK
3	97	104	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	4e-50	bZIP family protein