PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024978592.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 342aa MW: 36817.7 Da PI: 9.2473

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024978592.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.2	4.2e-39	65	123	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk + XP_024978592.1 65 NQKLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKGT 123 6899****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MIQELFGGGA AGLLNRDRNL PISGVFEASP SPSPSSSTTN GNTTTNAATN NATTVGNNAP 60 TTSDNQKLRC PRCDSSNTKF CYYNNYNLTQ PRHFCKTCRR YWTKGGALRN VPIGGGCRKN 120 KGTTIAAAVG KPISATGKLK AVVSSELGRS GFINGFDQEF TPNPILWSGP PQTSHLLSLL 180 RATQNPNPNF ASNSVTHMKD QSFMVGSNMS NLGFEPLGQA SSLGLCSSLW RNNQLNHQQA 240 QQNHHDQQGV MATGHEVQNI ENNPSGHQRY QRLRSSSPAN YYHHDHQPTP LILGGNVITN 300 TSSSTTTSTI LDSAPVLASG EMGFWNQNLP WSDLPAANGA YP

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MIQELFGGGA AGLLNRDRNL PISGVFEASP SPSPSSSTTN GNTTTNAATN NATTVGNNAP  60
TTSDNQKLRC PRCDSSNTKF CYYNNYNLTQ PRHFCKTCRR YWTKGGALRN VPIGGGCRKN  120
KGTTIAAAVG KPISATGKLK AVVSSELGRS GFINGFDQEF TPNPILWSGP PQTSHLLSLL  180
RATQNPNPNF ASNSVTHMKD QSFMVGSNMS NLGFEPLGQA SSLGLCSSLW RNNQLNHQQA  240
QQNHHDQQGV MATGHEVQNI ENNPSGHQRY QRLRSSSPAN YYHHDHQPTP LILGGNVITN  300
TSSSTTTSTI LDSAPVLASG EMGFWNQNLP WSDLPAANGA YP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	1e-34	Dof family protein