PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024978596.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 196aa    MW: 22795.9 Da    PI: 9.6433
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024978596.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.31.4e-32117175159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+
  XP_024978596.1 117 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDSCRVKKRVERLAEDPRMVITTYEGRHAHS 175
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MLNQAFLEDQ EFLPFPTPTN MISHLPLDSN QTLKTLSPLS HHSKPQLDLG ASHLLPNLQT  60
SNWAWGEVSE IISNKILGRS RDDHLGVSGM KMKKFKSRRK VREPRFCFKT MSDIDVLDDG  120
YKWRKYGQKV VKNTQHPRSY YRCTQDSCRV KKRVERLAED PRMVITTYEG RHAHSPSLNE  180
EDSEANSSKL CNFFWL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.18e-61WRKY family protein