PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024978627.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 192aa    MW: 21209.9 Da    PI: 7.4521
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024978627.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.69.9e-21119168255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    +  r++lg+fgta+ Aa+a+++a+++++g
  XP_024978627.1 119 KYRGVRRRP-WGKWAAEIRDPC----KaCRVWLGTFGTAKAAARAYDEAALNFRG 168
                     8********.**********84....369***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MARDNLCMLN NSDIVAADED VNGWLALETL LGPMFGCRRK EEMSTMVSAL SYVVAGGVAT  60
GADILGGGSK RGRHDEVVHV MNEDSIFAHE KEKEKEGSTY TYMNTESSST IEDDGLERKY  120
RGVRRRPWGK WAAEIRDPCK ACRVWLGTFG TAKAAARAYD EAALNFRGSK AKLNFPQDVQ  180
LHGTQSFRPK GV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.17e-31ERF family protein