PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024978628.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 190aa    MW: 20952.6 Da    PI: 7.4521
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024978628.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.69.7e-21117166255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    +  r++lg+fgta+ Aa+a+++a+++++g
  XP_024978628.1 117 KYRGVRRRP-WGKWAAEIRDPC----KaCRVWLGTFGTAKAAARAYDEAALNFRG 166
                     8********.**********84....369***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MARDNLCMLN NSDIVAADED VNGWLALETL LGPMFGCRRK EEMSTMVSAL SYVVAGGVAT  60
GADILGGGSK RGRHDEVVHV MNEDSIFAHE KEKEGSTYTY MNTESSSTIE DDGLERKYRG  120
VRRRPWGKWA AEIRDPCKAC RVWLGTFGTA KAAARAYDEA ALNFRGSKAK LNFPQDVQLH  180
GTQSFRPKGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.13e-31ERF family protein