PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024978665.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 350aa MW: 39350.9 Da PI: 6.0556

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024978665.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.1	1.6e-12	63	111	4	56
XCHHHCHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLe.ekvkeLeaeNkaLkkeleelkkev 56 +k+ rr+++NReAAr+sR+RKka++++Le + k L e ele+ + ++ XP_024978665.1 63 DKVLRRLAQNREAARKSRLRKKAYVQQLEvSRLKLLHLEQ-----ELEQTRAQC 111 7999************************933555555444.....555555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MDVYEPMHQF SMWGDFKGNI YQDASATMII EVDAKLDNQS EDTSHTTIGP SNQCDQEASK 60 PGDKVLRRLA QNREAARKSR LRKKAYVQQL EVSRLKLLHL EQELEQTRAQ CALMSGGVNV 120 CHLGFPGGAN SVTPAGIAAF KMEYERWVEE QNKKTNALKT ALHSPLPDME LHILVDDTMN 180 HYANLFTIKA NAAKVDVCYL ISGVWKTSTE RLFLWIGGFR PSELLKVLVP QLDLLDQQSH 240 DLSNLIQACQ QAEDSLSQGM EKLQQTLAEA VAFAHALGGG CYEMTNAMDK LEELVRLVIQ 300 ADYVRKEALQ QTIRYLTTRQ AAQGLISLGE YFQRLRDLSS AWAMRLCEPA

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MDVYEPMHQF SMWGDFKGNI YQDASATMII EVDAKLDNQS EDTSHTTIGP SNQCDQEASK  60
PGDKVLRRLA QNREAARKSR LRKKAYVQQL EVSRLKLLHL EQELEQTRAQ CALMSGGVNV  120
CHLGFPGGAN SVTPAGIAAF KMEYERWVEE QNKKTNALKT ALHSPLPDME LHILVDDTMN  180
HYANLFTIKA NAAKVDVCYL ISGVWKTSTE RLFLWIGGFR PSELLKVLVP QLDLLDQQSH  240
DLSNLIQACQ QAEDSLSQGM EKLQQTLAEA VAFAHALGGG CYEMTNAMDK LEELVRLVIQ  300
ADYVRKEALQ QTIRYLTTRQ AAQGLISLGE YFQRLRDLSS AWAMRLCEPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65210.2	1e-115	bZIP family protein