PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024978666.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 346aa MW: 38982.5 Da PI: 6.0556

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024978666.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.1	1.6e-12	63	111	4	56
XCHHHCHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLe.ekvkeLeaeNkaLkkeleelkkev 56 +k+ rr+++NReAAr+sR+RKka++++Le + k L e ele+ + ++ XP_024978666.1 63 DKVLRRLAQNREAARKSRLRKKAYVQQLEvSRLKLLHLEQ-----ELEQTRAQC 111 7999************************933555555444.....555555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MDVYEPMHQF SMWGDFKGNI YQDASATMII EVDAKLDNQS EDTSHTTIGP SNQCDQEASK 60 PGDKVLRRLA QNREAARKSR LRKKAYVQQL EVSRLKLLHL EQELEQTRAQ CALMSGGVNV 120 CHLGFPGGAN SGIAAFKMEY ERWVEEQNKK TNALKTALHS PLPDMELHIL VDDTMNHYAN 180 LFTIKANAAK VDVCYLISGV WKTSTERLFL WIGGFRPSEL LKVLVPQLDL LDQQSHDLSN 240 LIQACQQAED SLSQGMEKLQ QTLAEAVAFA HALGGGCYEM TNAMDKLEEL VRLVIQADYV 300 RKEALQQTIR YLTTRQAAQG LISLGEYFQR LRDLSSAWAM RLCEPA

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MDVYEPMHQF SMWGDFKGNI YQDASATMII EVDAKLDNQS EDTSHTTIGP SNQCDQEASK  60
PGDKVLRRLA QNREAARKSR LRKKAYVQQL EVSRLKLLHL EQELEQTRAQ CALMSGGVNV  120
CHLGFPGGAN SGIAAFKMEY ERWVEEQNKK TNALKTALHS PLPDMELHIL VDDTMNHYAN  180
LFTIKANAAK VDVCYLISGV WKTSTERLFL WIGGFRPSEL LKVLVPQLDL LDQQSHDLSN  240
LIQACQQAED SLSQGMEKLQ QTLAEAVAFA HALGGGCYEM TNAMDKLEEL VRLVIQADYV  300
RKEALQQTIR YLTTRQAAQG LISLGEYFQR LRDLSSAWAM RLCEPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65210.2	1e-117	bZIP family protein