PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024978843.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bZIP
Protein Properties Length: 171aa    MW: 19745 Da    PI: 10.3837
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024978843.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.45.4e-1276119649
                     HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                     r rrk++NRe+ArrsR+RK++ +e L+++    e+ N++L k+l
  XP_024978843.1  76 RRRRKISNRESARRSRLRKQKHLETLRNRLSGYETGNRELMKRL 119
                     789***********************************999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MSSSFFSSTT GDHLSFTGFL DDILLDFPPQ NVNSSVIVFS GSDDNNNNNS TPKTNTSSSG  60
SNDGEKNLNP VDEQLRRRRK ISNRESARRS RLRKQKHLET LRNRLSGYET GNRELMKRLM  120
FVNHHGQIFR RENQRLRSES VMLQQKLCYL HQALLELHHH PLSASAWPCN Y
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18894RRSRLRK
28895RRSRLRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.17e-15bZIP family protein