PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024978864.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family GATA
Protein Properties Length: 217aa    MW: 23707.3 Da    PI: 8.4101
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024978864.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.91.9e-2095129135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  XP_024978864.1  95 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 129
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MYRCGGSNNA MVFSMPYDGE SPTSSAVDCT LSLGTPATRL TADYDRVNER RPSANWSANF  60
CWDILQNSPS QKPNRSGGNG GTTTAAGDPL LARRCANCDT TSTPLWRNGP RGPKSLCNAC  120
GIRFKKEERR ANAAATVTTG GSEMAETHHH QLMMNGNHPW VHHTQATNKL PSCYSPAAAV  180
KGNEFRFIDD VDDRDSPFLS WRLNVTDRAG LVHGFTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.17e-50GATA family protein