PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024979085.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family C2H2
Protein Properties Length: 111aa    MW: 11753.1 Da    PI: 8.2401
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024979085.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.000431638123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C+++F++   L  H r+H
  XP_024979085.1 16 HECSICHRCFPTGQALGGHKRRH 38
                    79*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MVCCATHSGV GGGRSHECSI CHRCFPTGQA LGGHKRRHYE GVIGGGRATS SGVTSSEGVG  60
STNSQRAFDL NLPAMPEFLP GFADDEVESP HPAKKSRLFP PVKKETNEKN T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.13e-21C2H2 family protein