PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024979442.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 181aa    MW: 20307.9 Da    PI: 9.5723
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024979442.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.96.8e-20115164255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae Aa+a+++a+ +++g
  XP_024979442.1 115 NYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFETAESAARAYDRAAIEFRG 164
                     59*******.**********94....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MERATTILRP PSQPRRRLTN HEEASIMVKA LKNVIIGSTG SSNVDQQQRY DFRSFYTSDY  60
AAAGSEPVEY LPEVLLSQTC PFCRISGCLG CNYFMDDMEQ NDGGSGGPIK KKKKNYRGVR  120
QRPWGKWAAE IRDPRKAARV WLGTFETAES AARAYDRAAI EFRGTTAKLN FPLADYATPP  180
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-31ERF family protein