PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024979992.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 374aa MW: 42063.5 Da PI: 8.3971

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024979992.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	22.1	3.3e-07	241	276	17	52
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 A+rsR RK+++i+eLe+ v++L+ae ++ el+ + XP_024979992.1 241 AQRSRVRKLQYIAELERNVQALQAEGSEVSAELKFI 276 89***********************99888888755 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MENSKGPSTM RNMYSGKHYS LPPKSPFPSV APFYADYAPT AVSGPKGVPK YKDGNSHHQR 60 TSSESLLIEE QPSWLDELLD EPETPVRRGH RRSSSDSFTY MEAANANIER AAQVEYRLRN 120 MNSAPSWGSQ DFDLYKDARN ASFYAEHSPL IKKNQAWDSP QNALAHSSGT ASLRDSLVLQ 180 NSTTSGASQE VKKIASVTTE KQDTVESCTQ DSHTSFERND ASNTKASASE TDTKRAKQQF 240 AQRSRVRKLQ YIAELERNVQ ALQAEGSEVS AELKFINQRS LILSMENKAL KQRLDNLAQE 300 QLIKYLEHEV LEREIGRLRT LYKQQQQPPT EQPILSHHRH TNSRDSVESQ FANLSLKNKE 360 SGAVRDAVSG PLHI

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MENSKGPSTM RNMYSGKHYS LPPKSPFPSV APFYADYAPT AVSGPKGVPK YKDGNSHHQR  60
TSSESLLIEE QPSWLDELLD EPETPVRRGH RRSSSDSFTY MEAANANIER AAQVEYRLRN  120
MNSAPSWGSQ DFDLYKDARN ASFYAEHSPL IKKNQAWDSP QNALAHSSGT ASLRDSLVLQ  180
NSTTSGASQE VKKIASVTTE KQDTVESCTQ DSHTSFERND ASNTKASASE TDTKRAKQQF  240
AQRSRVRKLQ YIAELERNVQ ALQAEGSEVS AELKFINQRS LILSMENKAL KQRLDNLAQE  300
QLIKYLEHEV LEREIGRLRT LYKQQQQPPT EQPILSHHRH TNSRDSVESQ FANLSLKNKE  360
SGAVRDAVSG PLHI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58110.1	1e-103	bZIP family protein