PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024980165.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 228aa MW: 24906.4 Da PI: 8.5986

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024980165.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124	4.8e-39	25	84	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e++lkcprC+s+ntkfCyynny+lsqPr+fCk+CrryWtkGG+lrn+PvGgg+rk k+s XP_024980165.1 25 EHHLKCPRCQSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGTLRNIPVGGGTRKITKRS 84 7789***************************************************87765 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MHRHPSSTAF SSPMDHMNPK FPDHEHHLKC PRCQSSNTKF CYYNNYNLSQ PRHFCKNCRR 60 YWTKGGTLRN IPVGGGTRKI TKRSSNPNRR TSPAMAPPPP IPAEQQPKSE PSSIVYGFGN 120 QQMEGDGGGS FSSLLGSSSM GAFGNLLMDG LSSNLVSKSD DDDVLIRNPV ADEFRSSFLR 180 LNDNNDQKES GNGNGNGNGG GRGESSCWNG GENGWPDLSI FTPGTSFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	2e-36	Dof family protein