PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024980282.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 268aa    MW: 28689.4 Da    PI: 4.4502
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024980282.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-174999155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr +  +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+++++g
  XP_024980282.1 49 PVYRGVRKRA-WGKWVSEIREPKK---KSRIWLGTFSNPEMAARAHDVAALSIKG 99
                    68*****887.**********854...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MVEAPNSGTA FSDPFAKGTG LTEPDAKRMK RNADDDGGNS TSNNNSKHPV YRGVRKRAWG  60
KWVSEIREPK KKSRIWLGTF SNPEMAARAH DVAALSIKGK TAILNFPELA DLLPRPESCS  120
PRDIQAAATK AASMEQLNPT TIATTTTTTA TPPSTPSTSS SSSYSVGSTL TSSSSTASLV  180
TSEEVSTGTP PAEELSEIVE LPSLGTSYDS AESRDDFVFV DSVWDYYSSP PWPEDYDDVG  240
YFGGDPPSSS GSLLSSSGFF FDTLLWQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.14e-50ERF family protein