PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024980489.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bZIP
Protein Properties Length: 163aa    MW: 18243.3 Da    PI: 4.9961
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024980489.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.85.5e-143485556
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
                    ++ +r+++NRe+ArrsR+RK++ ++eL++   +L +eN + ++ ++  ++++
  XP_024980489.1 34 RKRKRMISNRESARRSRLRKQQHLDELATLLSQLRKENNQIISSVSITTQHY 85
                    6789************************************999888777666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MASSSGTTTT SSGGSYPIQN SGSEEDLQQL MDQRKRKRMI SNRESARRSR LRKQQHLDEL  60
ATLLSQLRKE NNQIISSVSI TTQHYMGVEE ENSVLRAQVA ELSYRLQSLN EIIAFRNQPV  120
DFGCGFAEEL YGGGGGGTEF VDEFMSYVYA NQPILASADM IQY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14753RRSRLRK
24754RRSRLRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.15e-44bZIP family protein