PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024980529.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 179aa    MW: 19971.6 Da    PI: 7.9941
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024980529.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-19452153
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                    ++++GVr+++ +g+Wv+eIr+p        kr++lg+f taeeAa+a+++a+  +
  XP_024980529.1  4 KKFRGVRQRH-WGSWVSEIRHP-----LlkKRVWLGTFETAEEAARAYDEAAVLM 52
                    59*******9.**********8.....335*********************9665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MGQKKFRGVR QRHWGSWVSE IRHPLLKKRV WLGTFETAEE AARAYDEAAV LMSGCNAKTN  60
FPILKAESYA SPSTATSALS AMLSAKLRKC CKAPSPSLTC LRLDTESSHI GVWQKRAGVH  120
SDSNWVMTVE LGKKKTDHKI EVEADDPSSR GIDDDVHTRS SEEEDKIALQ MIEELLNTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.12e-62ERF family protein