PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024980531.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 218aa    MW: 24008.2 Da    PI: 5.9075
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024980531.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.81.1e-171766255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr +k +g+Wv+eIr p++   r+r++lg+++t+++Aa+a +aa  +l+g
  XP_024980531.1 17 KFTGVRKRK-WGKWVSEIRLPNS---RQRIWLGSYDTPQKAARAFDAALFCLRG 66
                    799***999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MVKPTTSSAP DTNSDAKFTG VRKRKWGKWV SEIRLPNSRQ RIWLGSYDTP QKAARAFDAA  60
LFCLRGSTAR FNFPHQPPDI PGGRSLPPSQ IQAAAARFAN ANCTNTPTTH DHSSSPSPSP  120
SSSSCNTHSD QLNQTDQGES WTSQLDLTSP FLHDFTDYLN LNNNTSNNTG GVPDFGIYPG  180
FDDYFMPSPP ATTDDYGHEQ AENYDGIILQ GPSFLWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-43ERF family protein