PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024980748.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 259aa    MW: 29648.1 Da    PI: 7.0716
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024980748.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.6e-193180255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     ++GVr++  +g+WvAeIr+p++   r+r +lg+f taeeAa a+++a+++l+g
  XP_024980748.1 31 EFRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAAMAYDEAARRLYG 80
                    59****999.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MDNCRRTTAP FKPWKKGPTR GKGGPQNAAC EFRGVRQRTW GKWVAEIREP KKRTRLWLGS  60
FATAEEAAMA YDEAARRLYG PDAYLNLPHL RSNFNPLNKS HKFKWFPANK LASMFPATGL  120
LNLNAQPSVH VIHQRLQELK KTQPSSSSSS SSNNSSIFDQ INHDQVQVNS EKTHVKECIE  180
KPQIDLNEFL QQLGVLKKDD QKDKTSFDHE AVIEESGLGE EDFNWDVLSE LHGSDQDHGY  240
QIYDDHDQEL VLPTTIWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.15e-68ERF family protein