PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024980861.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

G2-like

Protein Properties

Length: 254aa MW: 29113.8 Da PI: 6.2455

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024980861.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95.4	4.4e-30	11	65	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rl+Wt+eLH+ F +av+qLGG+++AtPk il++m++ gLt++hvkSHLQkYR+ XP_024980861.1 11 KERLKWTQELHDLFEKAVDQLGGPDRATPKGILKTMGIAGLTIYHVKSHLQKYRM 65 68****************************************************8 PP
2	Myb_DNA-binding	59.9	5.4e-19	13	64	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e+++l+ +av qlGg+ t+k I +tmg g+t +++ks++qky+ XP_024980861.1 13 RLKWTQELHDLFEKAVDQLGGPdraTPKGILKTMGiAGLTIYHVKSHLQKYR 64 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MGTNCDDSLR KERLKWTQEL HDLFEKAVDQ LGGPDRATPK GILKTMGIAG LTIYHVKSHL 60 QKYRMSKFIP ESSKGDKFEK RSLSEMFPHF SKTSGIQLNE ALQMQMEVER RLSDQLEVQK 120 NLKLKIEAQS RFLERIAQDY KTRPIAKTNK PISLTSLPSL CDESESIIND YFESDSEVDT 180 RHIHESRPTK RARVVLIDDD DDDDDVSQEI FKLNSESILL PKGGNTFHSQ DDIFPWSIGF 240 CHSPLIRASH GSFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	5e-52	G2-like family protein