PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024980956.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 200aa    MW: 22004.7 Da    PI: 5.5843
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024980956.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.37.3e-1080128255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r++++  +rrRR ri  a++ L +llP++     k  +K  i+   ++YIk Lq
  XP_024980956.1  80 RQKASDTDRRRRTRIAAALDALEDLLPES-----KEGNKTNIVDDCIDYIKCLQ 128
                     889999**********************9.....679***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MAPYYVEYLA GNAISDIQGE LLYNNTGIGC SFTPVESFHS MDAHQKQGPD EGLDNAAQNQ  60
PNMSASTSGI LTKSRKTYLR QKASDTDRRR RTRIAAALDA LEDLLPESKE GNKTNIVDDC  120
IDYIKCLQLH LKELSQNRLG GEPTSNHLAY LEGYGHYLVH ENTASGPLQD MMAKLLDGNP  180
SAATKLLESR GLFMMPNAPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.13e-10bHLH family protein