PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024980970.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 211aa    MW: 23736 Da    PI: 8.4382
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024980970.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.75.8e-1875125255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr ++ +g+++AeIrd + ng  +r++lg+f++ae Aa a+++a+ + +g
  XP_024980970.1  75 SYRGVRKRP-WGKFAAEIRDSTRNG--TRVWLGTFDSAEAAAMAYDQAAFSTRG 125
                     69*******.**********44465..**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MATSFILYDS PETSCSWDEL LFRHNAHPFN QFDYHDAFYP VLLAEEGGIE FPVPNSTAVS  60
AAKKEVTYEP KKVKSYRGVR KRPWGKFAAE IRDSTRNGTR VWLGTFDSAE AAAMAYDQAA  120
FSTRGTLAVL NFPVERVKES LKEMKYGFEE GCSPVMTLKK RHSLRKKPAV RKNKPVAATV  180
PEEKPTVVFQ DLGVDYLESL LLLCESSTPQ S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-45ERF family protein