PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024981405.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 229aa    MW: 26318.3 Da    PI: 4.7654
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024981405.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.62.6e-284299359
                    -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY  3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                    D ++WrKYGqK++kgs++pr+YYrC+++ +C++kk+ve +++d ++++itY++ Hnh+
  XP_024981405.1 42 DCWSWRKYGQKPIKGSPYPRGYYRCSTSkSCSAKKQVEICRTDASMLIITYTSAHNHP 99
                    99***********************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MEQDSPLNDS DIQPSKKRKV ADKIVVTVKL EGKKKTENPS CDCWSWRKYG QKPIKGSPYP  60
RGYYRCSTSK SCSAKKQVEI CRTDASMLII TYTSAHNHPD PALSKESKQA KTKIPHDDSN  120
STAPEPDQKN EDQKPIITVV DDQDPIIEEN DNFRYIQTPE NETHLTVDLE NTFFDEEPLS  180
YPNLMTFSAL KSEENDFYDE LEELPMSSST FKSFMRTNFF EERVLVQPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.19e-35WRKY family protein