PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024981494.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 555aa MW: 61858.2 Da PI: 7.053

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024981494.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.8	7.2e-11	263	302	5	44
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 k rr+++NReAAr+sR+RKka++++Le +L++ ++ XP_024981494.1 263 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQE 302 7789************************876666665554 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MSFERGEDHH RHHQNHLSPP PQDHQEEAKT PPFLMNIMAT TNKGYSNTST NTFLDPQQHH 60 HHHHHQPYHQ LQFVQHQDHH HDDSNQISFA MINHSMPSSS IRPPTNPTTT TNNNIMRTDG 120 GGPYDLADLD QALFLYGEGQ ASADPSALSS VQDHQRRDSL ELMRAEGSTS SGMRPPTLNI 180 FPSQPMHVVD PSTSTTKATT GLVSPSSSGS RRPSEPSMEN IANPQKDAPP PAPQSSKAIK 240 REGNKKGPTT SSDQGRPKTP DPKTLRRLAQ NREAARKSRL RKKAYVQQLE SSRIKLTQLE 300 QELQRARAQG VYLGGGGGVL GADQGVPLGM NNISSDAAVF DMEYARWLED YHRQMCELQA 360 AVQEHLPENE LRIYVDNCIA RIDDVMNLKS IVAKSDVFHI ISGTWKTPAE RCFMWIGGFR 420 PSELIKIILG QIEPLTEQQL MAICEVQQAT QEAEEALTQG LEALNQSLSD TIASDALSSP 480 TNMANYMGQM AAAMNKLSTL ESFVIQADNL RRQTIHHVLQ LLTTRQAARS LLAVAEHFHR 540 LRSLSSLWVA RPRQD

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MSFERGEDHH RHHQNHLSPP PQDHQEEAKT PPFLMNIMAT TNKGYSNTST NTFLDPQQHH  60
HHHHHQPYHQ LQFVQHQDHH HDDSNQISFA MINHSMPSSS IRPPTNPTTT TNNNIMRTDG  120
GGPYDLADLD QALFLYGEGQ ASADPSALSS VQDHQRRDSL ELMRAEGSTS SGMRPPTLNI  180
FPSQPMHVVD PSTSTTKATT GLVSPSSSGS RRPSEPSMEN IANPQKDAPP PAPQSSKAIK  240
REGNKKGPTT SSDQGRPKTP DPKTLRRLAQ NREAARKSRL RKKAYVQQLE SSRIKLTQLE  300
QELQRARAQG VYLGGGGGVL GADQGVPLGM NNISSDAAVF DMEYARWLED YHRQMCELQA  360
AVQEHLPENE LRIYVDNCIA RIDDVMNLKS IVAKSDVFHI ISGTWKTPAE RCFMWIGGFR  420
PSELIKIILG QIEPLTEQQL MAICEVQQAT QEAEEALTQG LEALNQSLSD TIASDALSSP  480
TNMANYMGQM AAAMNKLSTL ESFVIQADNL RRQTIHHVLQ LLTTRQAARS LLAVAEHFHR  540
LRSLSSLWVA RPRQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06839.3	1e-161	bZIP family protein