PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024981497.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 546aa MW: 60785 Da PI: 7.1443

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024981497.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.9	7e-11	254	293	5	44
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 k rr+++NReAAr+sR+RKka++++Le +L++ ++ XP_024981497.1 254 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQE 293 7789************************876666665554 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MSFERGEDHH RHHQNHLSPP PQDHQEEAKT PPFLMNIMAT TNKGYSNTST NTFLDPQQHH 60 HHHHHQPYHQ LQFVQHQDHH HDDSNQISFA MINHSMPSSS IRPPTNPTTT TNNNIMRTDG 120 GGPYDLADLD QALFLYGEGQ ASADPSALSS VQDHQRQGST SSGMRPPTLN IFPSQPMHVV 180 DPSTSTTKAT TGLVSPSSSG SRRPSEPSME NIANPQKDAP PPAPQSSKAI KREGNKKGPT 240 TSSDQGRPKT PDPKTLRRLA QNREAARKSR LRKKAYVQQL ESSRIKLTQL EQELQRARAQ 300 GVYLGGGGGV LGADQGVPLG MNNISSDAAV FDMEYARWLE DYHRQMCELQ AAVQEHLPEN 360 ELRIYVDNCI ARIDDVMNLK SIVAKSDVFH IISGTWKTPA ERCFMWIGGF RPSELIKIIL 420 GQIEPLTEQQ LMAICEVQQA TQEAEEALTQ GLEALNQSLS DTIASDALSS PTNMANYMGQ 480 MAAAMNKLST LESFVIQADN LRRQTIHHVL QLLTTRQAAR SLLAVAEHFH RLRSLSSLWV 540 ARPRQD

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MSFERGEDHH RHHQNHLSPP PQDHQEEAKT PPFLMNIMAT TNKGYSNTST NTFLDPQQHH  60
HHHHHQPYHQ LQFVQHQDHH HDDSNQISFA MINHSMPSSS IRPPTNPTTT TNNNIMRTDG  120
GGPYDLADLD QALFLYGEGQ ASADPSALSS VQDHQRQGST SSGMRPPTLN IFPSQPMHVV  180
DPSTSTTKAT TGLVSPSSSG SRRPSEPSME NIANPQKDAP PPAPQSSKAI KREGNKKGPT  240
TSSDQGRPKT PDPKTLRRLA QNREAARKSR LRKKAYVQQL ESSRIKLTQL EQELQRARAQ  300
GVYLGGGGGV LGADQGVPLG MNNISSDAAV FDMEYARWLE DYHRQMCELQ AAVQEHLPEN  360
ELRIYVDNCI ARIDDVMNLK SIVAKSDVFH IISGTWKTPA ERCFMWIGGF RPSELIKIIL  420
GQIEPLTEQQ LMAICEVQQA TQEAEEALTQ GLEALNQSLS DTIASDALSS PTNMANYMGQ  480
MAAAMNKLST LESFVIQADN LRRQTIHHVL QLLTTRQAAR SLLAVAEHFH RLRSLSSLWV  540
ARPRQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06839.3	1e-163	bZIP family protein