PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024981675.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 441aa MW: 47536.4 Da PI: 9.574

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024981675.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	42.6	1.3e-13	356	407	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r+rr++kNRe+A rsR+RK+a++ eLe + L++eN +Lk+ l e++ + XP_024981675.1 356 RRQRRMIKNRESAARSRARKQAYTVELEAELNMLKEENAQLKQALAEIERKR 407 79****************************************9999888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MVVPDSEIMS PGEVESPLQS DQHQPRNNVH NALLPQLGRQ SSIYSLTLDE FQHTLCESGK 60 NFGSMNMDEF LNSIWTAEEN QAHAQVHPAA AATAGGSVST SAAMAPNSAS SSGQFLTGVN 120 TGAAEPNMIV KQLSLPRQGS LNLLGPLSRK TVDEVWSEIQ KTQHDHHPSN NSSNVQVPGS 180 AQRQPTYGEM TLEDFLVKAG VVREQNHPNA PPVQQQPPPP FGLYPNGNNR VVGPPPGSTH 240 VIRPLMAVST GGGATTIQPY SPLIREAQGY PGGGKRSSTY QPQPPPCYGG MVGNGGGVAG 300 GYGQGLGIGS PVSPVSSDGI ATSQLDSGNQ YALEMGGIRG GRKRIIDGPV EKVVERRQRR 360 MIKNRESAAR SRARKQAYTV ELEAELNMLK EENAQLKQAL AEIERKRKQQ FFEDMRMKAL 420 PRAQKAKEKL RVLRRSSSCP T

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MVVPDSEIMS PGEVESPLQS DQHQPRNNVH NALLPQLGRQ SSIYSLTLDE FQHTLCESGK  60
NFGSMNMDEF LNSIWTAEEN QAHAQVHPAA AATAGGSVST SAAMAPNSAS SSGQFLTGVN  120
TGAAEPNMIV KQLSLPRQGS LNLLGPLSRK TVDEVWSEIQ KTQHDHHPSN NSSNVQVPGS  180
AQRQPTYGEM TLEDFLVKAG VVREQNHPNA PPVQQQPPPP FGLYPNGNNR VVGPPPGSTH  240
VIRPLMAVST GGGATTIQPY SPLIREAQGY PGGGKRSSTY QPQPPPCYGG MVGNGGGVAG  300
GYGQGLGIGS PVSPVSSDGI ATSQLDSGNQ YALEMGGIRG GRKRIIDGPV EKVVERRQRR  360
MIKNRESAAR SRARKQAYTV ELEAELNMLK EENAQLKQAL AEIERKRKQQ FFEDMRMKAL  420
PRAQKAKEKL RVLRRSSSCP T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36270.1	5e-94	bZIP family protein